During the hackathon, group activities will be recorded in a
Wiki
site. Please create sub-categorized pages and log your activities as much as possible.
Topics may cover the followings, but are not limited to:
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Standardization of RDF data, metadata, ontologies and provenance
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Interoperable system for interlinking database resources
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Development of tools for automation, utilization and documentation of RDF data
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Development of applications including visualization for Linked Open Data
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Application of machine learning and artificial intelligence technologies on RDF data
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Data science to grasp information from large scale and heterogeneous RDF datasets
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Reproducible research and workflows for bioinformatics, wet biology and robotics
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Natural language processing, literature annotation and QA system for knowledge discovery
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Quality assessment of SPARQL endpoints, RDF data and triple stores
and the target domains may include:
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Human genome variation, epigenomics, drugs and biomedical information
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Other animal, plant and microbial genomics with phenotypes and orthology
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Omics including metagenomics, transcriptomics, proteomics, metabolomics and glycomics
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Any other relevant life sciences and biomedical research
Hackathon schedule:
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7:00- 9:00 Breakfast
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9:00-12:00 Hack, hack, hack
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12:00-13:00 Lunch
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13:00-18:00 Hack, hack, hack
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19:00-20:00 Dinner
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20:00-24:00 Hack and/or discussion (liquorthon)
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9:00
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11:30
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15:00
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Sep 11 (Mon)
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Move to Morioka by Shinkansen
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Move to Koiwai Farm Lunch from Morioka St. West Gate Bus Terminal
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Move to Hotel and start hacking
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9:00-12:00
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13:00-19:00
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20:00-24:00
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Sep 12 (Tue)
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Hack
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Hack
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Hack / discussion
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Sep 13 (Wed)
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Hack
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Wrap-up (intermediate)
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Banquet / discussion
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Sep 14 (Thu)
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Hack
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Hack
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Hack / discussion
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Sep 15 (Fri)
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Hack
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Hack, Wrap-up (overall)
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Discussion
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Sep 16 (Sat)
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Writethon
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