During the hackathon, group activities will be recorded in a Wiki site. Please create sub-categorized pages and log your activities as much as possible.
Topics may cover the followings, but are not limited to:
- Standardization of RDF data, metadata, ontologies and provenance
- Interoperable system for interlinking database resources
- Development of tools for automation, utilization and documentation of RDF data
- Development of applications including visualization for Linked Open Data
- Application of machine learning and artificial intelligence technologies on RDF data
- Data science to grasp information from large scale and heterogeneous RDF datasets
- Reproducible research and workflows for bioinformatics, wet biology and robotics
- Natural language processing, literature annotation and QA system for knowledge discovery
- Quality assessment of SPARQL endpoints, RDF data and triple stores
and the target domains may include:
- Human genome variation, epigenomics, drugs and biomedical information
- Other animal, plant and microbial genomics with phenotypes and orthology
- Omics including metagenomics, transcriptomics, proteomics, metabolomics and glycomics
- Any other relevant life sciences and biomedical research
Hackathon schedule:
- 7:00- 9:00 Breakfast
- 9:00-12:00 Hack, hack, hack
- 12:00-13:00 Lunch
- 13:00-18:00 Hack, hack, hack
- 19:00-20:00 Dinner
- 20:00-24:00 Hack and/or discussion (liquorthon)
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9:00 |
11:30 |
15:00 |
Sep 11 (Mon) |
Move to Morioka by Shinkansen |
Move to Koiwai Farm Lunch from Morioka St. West Gate Bus Terminal |
Move to Hotel and start hacking |
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9:00-12:00 |
13:00-19:00 |
20:00-24:00 |
Sep 12 (Tue) |
Hack |
Hack |
Hack / discussion |
Sep 13 (Wed) |
Hack |
Wrap-up (intermediate) |
Banquet / discussion |
Sep 14 (Thu) |
Hack |
Hack |
Hack / discussion |
Sep 15 (Fri) |
Hack |
Hack, Wrap-up (overall) |
Discussion |
Sep 16 (Sat) |
Writethon |
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